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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015908544.1_cds_XP_016458669.1_52273
CDS Infomation

[gene=LOC107782305] [db_xref=GeneID:107782305] [protein=probable protein phosphatase 2C 3 isoform X3] [protein_id=XP_016458669.1] [location=complement(join(14172..14391,15386..15618,15985..16110,16217..16324,16417..16480,16566..16719,16822..16993,17248..17304))] [gbkey=CDS]
Sequence

ATGAAAAAATGGAGAAGCCAACTGTTAGATATGGATGTGCAGCTCAGTCCAAGAAAGATC
TTTGATGGACATAATGGGACAGCAGCCGCAGTGTTCTCAAAGGATCATTTACTAAATCAT
GTTTTGAGTGCCATTCCTCGTGGACTAGGGAGGGACGAGTGGCTACACGCTTTGCCTCGT
GCACTAGTTGCAGGCTTTGTGAAAACTGATAAGGAGTTCCAGAGAAAAGGACAAACTTCC
GGAACCACAGCTACATTTGTGATTGTTGATGGATGGACTGTGACAGTTGCGTGTGTTGGA
GATTCGCGTTGCATTTTGGATACTCAGGGTGGTGCTGTTTCAGAATTAACTGTAGACCAT
AGGCTTGAAGAAAATGCGGAGGAAAGGGAGCGTGTCACAGCAAGTGGTGGTGAAGTAGGA
AGACTTAGTATTTTTGCTGGTACTGAGGTTGGTCCTCTTCGCTGTTGGCCAGGAGGTTTA
TGTCTTTCAAGATCAATCGGAGATATGGATGTAGGGGAATTCATTGTTCCAATACCATAT
GTCAAACAAGTAAAACTATCAACTGCAGGTGGAAGGCTAATCATTGCATCCGATGGAATT
TGGGACTCCTTATCGTCGGACATGGCTGCAAAGTCTTGTCGTGGCTTGCCTGCTGAGCTT
GCTGCTAGGCAAGTTGTGAAGGAAGCTTTGAGGACGCGTGGGCTGAAGGATGACACGACG
TGCATAGTAGTTGACATAATTCCTCCCGATAACACTGTACAGCCTGCAACTCCGACCAAG
AAATATAACAAACTCCAATCTCTTTTCTTCAGAAGAAAGTCACAGAAATCTACTGCTAAA
CTATCGAAAAAGCTGTCAGCTATAGGCATTGTAGAGGAACTGTTTGAAGAAGGATCAGCA
ATGCTTGCTGAAAGATTAGGGAGTGAGGATTCAAATGGTCCATCAATGTCCGGTCTCTTC
ATCTGTGCTATTTGCCAGGTTGACCTTGCTGCAAGCGAAGGCATATCAGTACATGCTGGT
TCAATTTTCTCGACGAGCTCAAAGCCTTGGCAAGGTCCGTTCCTATGTGCTGACTGTCGT
GATAAGAAGGACGCCATGGAAGGGAAACGGCCAAGTGGTGTTAAAGTCGCTTAA

Peptide Sequence

PEP ID

XP_016458669.1
PEP Infomation

PREDICTED: probable protein phosphatase 2C 3 isoform X3 [Nicotiana tabacum]
Sequence

MKKWRSQLLDMDVQLSPRKIFDGHNGTAAAVFSKDHLLNHVLSAIPRGLGRDEWLHALPR
ALVAGFVKTDKEFQRKGQTSGTTATFVIVDGWTVTVACVGDSRCILDTQGGAVSELTVDH
RLEENAEERERVTASGGEVGRLSIFAGTEVGPLRCWPGGLCLSRSIGDMDVGEFIVPIPY
VKQVKLSTAGGRLIIASDGIWDSLSSDMAAKSCRGLPAELAARQVVKEALRTRGLKDDTT
CIVVDIIPPDNTVQPATPTKKYNKLQSLFFRRKSQKSTAKLSKKLSAIGIVEELFEEGSA
MLAERLGSEDSNGPSMSGLFICAICQVDLAASEGISVHAGSIFSTSSKPWQGPFLCADCR
DKKDAMEGKRPSGVKVA

Transcript Sequence

Gene sequence data has not been registered.